Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Gm18027-201ENSMUST00000218947 619 ntBASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa1Q8VEE4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gm13823-201ENSMUST00000119930 345 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
Rpa1Q8VEE4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa1Q8VEE4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms