Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Gm18307-201ENSMUST00000206864 949 ntBASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Mir497b-201ENSMUST00000093601 125 ntBASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg1dQ8VE91 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg1dQ8VE91 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Mir7654-201ENSMUST00000185082 70 ntBASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Gm28911-201ENSMUST00000188837 117 ntBASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg1dQ8VE91 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retreg1dQ8VE91 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg1dQ8VE91 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg1dQ8VE91 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms