Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpap2Q8VC34 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.82□□□□□ -0.04
Rpap2Q8VC34 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Gm15678-201ENSMUST00000117573 960 ntBASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Gm13689-201ENSMUST00000119360 685 ntBASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpap2Q8VC34 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gm15371-201ENSMUST00000117057 784 ntBASIC14.81□□□□□ -0.04
Rpap2Q8VC34 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpap2Q8VC34 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpap2Q8VC34 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms