Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Gm27772-201ENSMUST00000184900 187 ntBASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Gm38294-201ENSMUST00000192831 381 ntBASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Gm18905-201ENSMUST00000205454 928 ntBASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps39Q8R5L3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.53□□□□□ -0.24
Vps39Q8R5L3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps39Q8R5L3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps39Q8R5L3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms