Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Gm24749-201ENSMUST00000157838 343 ntBASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Gm45433-201ENSMUST00000209386 247 ntBASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col23a1Q8K4G2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm9062-201ENSMUST00000117712 727 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm15131-201ENSMUST00000119124 595 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm17040-202ENSMUST00000170597 889 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm7848-201ENSMUST00000210739 718 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Gm10752-201ENSMUST00000218348 729 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col23a1Q8K4G2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Daam2-202ENSMUST00000224595 1926 ntBASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Gm8285-201ENSMUST00000208293 759 ntBASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.17■□□□□ 0.18
Col23a1Q8K4G2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Gm11667-201ENSMUST00000119828 486 ntBASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Gm19459-201ENSMUST00000176240 835 ntBASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.16■□□□□ 0.18
Col23a1Q8K4G2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms