Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm13597-201ENSMUST00000121239 375 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rprl2-201ENSMUST00000157150 290 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm6159-201ENSMUST00000191249 1724 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm37513-201ENSMUST00000194830 2268 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm38378-201ENSMUST00000195153 2268 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cystm1Q8K353 Gm45293-201ENSMUST00000209754 1812 ntBASIC8.5□□□□□ -1.05
Cystm1Q8K353 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm17968-201ENSMUST00000194902 784 ntBASIC8.49□□□□□ -1.05
Cystm1Q8K353 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm45747-201ENSMUST00000212203 999 ntBASIC8.49□□□□□ -1.05
Cystm1Q8K353 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Gm37660-201ENSMUST00000192754 1732 ntBASIC8.49□□□□□ -1.05
Cystm1Q8K353 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Cystm1Q8K353 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cystm1Q8K353 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cystm1Q8K353 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cystm1Q8K353 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cystm1Q8K353 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Cystm1Q8K353 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms