Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Syne4Q8CII8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Syne4Q8CII8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syne4Q8CII8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.2■□□□□ 0.02
Syne4Q8CII8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Syne4Q8CII8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Syne4Q8CII8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.18■□□□□ 0.02
Syne4Q8CII8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Gm10434-201ENSMUST00000101158 471 ntBASIC15.18■□□□□ 0.02
Syne4Q8CII8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Gm8738-201ENSMUST00000172606 329 ntBASIC15.18■□□□□ 0.02
Syne4Q8CII8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.18■□□□□ 0.02
Syne4Q8CII8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Nsd1-205ENSMUST00000224693 852 ntBASIC15.18■□□□□ 0.02
Syne4Q8CII8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms