Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.82□□□□□ -0.2
CopaQ8CIE6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.82□□□□□ -0.2
CopaQ8CIE6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm5354-201ENSMUST00000182417 973 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm18187-201ENSMUST00000196476 984 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.81□□□□□ -0.2
CopaQ8CIE6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopaQ8CIE6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm11478-201ENSMUST00000117851 599 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm14127-201ENSMUST00000117906 678 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm4804-201ENSMUST00000182234 999 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm43438-201ENSMUST00000198133 379 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm44608-201ENSMUST00000206827 855 ntBASIC13.8□□□□□ -0.2
CopaQ8CIE6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopaQ8CIE6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms