Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm12403-201ENSMUST00000121384 959 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm44344-201ENSMUST00000200287 129 ntBASIC16.71■□□□□ 0.27
Smc5Q8CG46 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smc5Q8CG46 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smc5Q8CG46 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smc5Q8CG46 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm43514-201ENSMUST00000198852 424 ntBASIC16.7■□□□□ 0.26
Smc5Q8CG46 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm17330-201ENSMUST00000221047 165 ntBASIC16.7■□□□□ 0.26
Smc5Q8CG46 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc5Q8CG46 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Gm18905-201ENSMUST00000205454 928 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Gm8396-201ENSMUST00000057361 823 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.69■□□□□ 0.26
Smc5Q8CG46 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smc5Q8CG46 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc5Q8CG46 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms