Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Gm6152-201ENSMUST00000151704 340 ntBASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf31Q8CCF0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm5687-201ENSMUST00000118252 640 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm11425-201ENSMUST00000119608 498 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm27847-201ENSMUST00000183711 107 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm27375-201ENSMUST00000183799 107 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Itm2b-204ENSMUST00000228637 783 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm9396-201ENSMUST00000076703 567 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf31Q8CCF0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm18062-201ENSMUST00000208020 547 ntBASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm18055-201ENSMUST00000208254 547 ntBASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm6091-201ENSMUST00000098307 165 ntBASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf31Q8CCF0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms