Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm5354-201ENSMUST00000182417 973 ntBASIC12.64□□□□□ -0.39
Cpne1Q8C166 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Gm28631-201ENSMUST00000190740 334 ntBASIC12.64□□□□□ -0.39
Cpne1Q8C166 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.64□□□□□ -0.39
Cpne1Q8C166 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.64□□□□□ -0.39
Cpne1Q8C166 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne1Q8C166 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.63□□□□□ -0.39
Cpne1Q8C166 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.63□□□□□ -0.39
Cpne1Q8C166 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.63□□□□□ -0.39
Cpne1Q8C166 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne1Q8C166 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.62□□□□□ -0.39
Cpne1Q8C166 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.62□□□□□ -0.39
Cpne1Q8C166 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.62□□□□□ -0.39
Cpne1Q8C166 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.62□□□□□ -0.39
Cpne1Q8C166 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne1Q8C166 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms