Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm28760-201ENSMUST00000185995 736 ntBASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm2423-201ENSMUST00000074863 733 ntBASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Sh3rf3Q8C120 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm7063-201ENSMUST00000186840 981 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm44719-201ENSMUST00000206404 149 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf3Q8C120 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm15376-201ENSMUST00000122258 783 ntBASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf3Q8C120 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms