Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.97■□□□□ 0.63
Usp47Q8BY87 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Gm10146-201ENSMUST00000072739 309 ntBASIC18.96■□□□□ 0.63
Usp47Q8BY87 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.96■□□□□ 0.63
Usp47Q8BY87 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.96■□□□□ 0.63
Usp47Q8BY87 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Usp47Q8BY87 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
Usp47Q8BY87 Gm5466-201ENSMUST00000119395 1890 ntBASIC18.95■□□□□ 0.62
Usp47Q8BY87 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.95■□□□□ 0.62
Usp47Q8BY87 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp47Q8BY87 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Gm28693-202ENSMUST00000190758 331 ntBASIC18.94■□□□□ 0.62
Usp47Q8BY87 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.94■□□□□ 0.62
Usp47Q8BY87 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.94■□□□□ 0.62
Usp47Q8BY87 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp47Q8BY87 Gm12957-201ENSMUST00000117835 377 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Gm27514-201ENSMUST00000183692 110 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms