Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm15678-201ENSMUST00000117573 960 ntBASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp43Q8BUM9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp43Q8BUM9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms