Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm12203-201ENSMUST00000118235 598 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm12209-201ENSMUST00000120089 596 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Mir1982-201ENSMUST00000157368 74 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm16177-201ENSMUST00000120728 718 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm14660-201ENSMUST00000119809 575 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm44069-201ENSMUST00000204898 506 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms