Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm12203-201ENSMUST00000118235 598 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm12209-201ENSMUST00000120089 596 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Mir1982-201ENSMUST00000157368 74 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr7Q8BU04 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm16177-201ENSMUST00000120728 718 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr7Q8BU04 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubr7Q8BU04 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm14660-201ENSMUST00000119809 575 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm44069-201ENSMUST00000204898 506 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr7Q8BU04 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr7Q8BU04 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms