Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm12291-201ENSMUST00000121627 311 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm8856-201ENSMUST00000185254 1144 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm5904-201ENSMUST00000210286 865 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm18212-201ENSMUST00000211678 889 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 AC161537.1-201ENSMUST00000226199 1015 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Abhd11os-203ENSMUST00000222613 363 ntBASIC18.84■□□□□ 0.61
Usp54Q8BL06 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp54Q8BL06 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp54Q8BL06 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC18.83■□□□□ 0.6
Usp54Q8BL06 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC18.83■□□□□ 0.6
Usp54Q8BL06 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Gm10702-201ENSMUST00000098929 1268 ntBASIC18.83■□□□□ 0.6
Usp54Q8BL06 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp54Q8BL06 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp54Q8BL06 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.82■□□□□ 0.6
Usp54Q8BL06 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gm11930-201ENSMUST00000117788 190 ntBASIC18.82■□□□□ 0.6
Usp54Q8BL06 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gm37201-201ENSMUST00000191845 523 ntBASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp54Q8BL06 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms