Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Gm6415-201ENSMUST00000118488 348 ntBASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Gm10253-201ENSMUST00000194270 940 ntBASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr3Q8BL00 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm9229-201ENSMUST00000222777 126 ntBASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr3Q8BL00 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm8410-201ENSMUST00000117225 605 ntBASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm15693-201ENSMUST00000120470 637 ntBASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm4804-201ENSMUST00000182234 999 ntBASIC11.79□□□□□ -0.52
Cdhr3Q8BL00 Gm27533-201ENSMUST00000183800 152 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms