Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm15770-201ENSMUST00000117498 584 ntBASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm10156-201ENSMUST00000122364 462 ntBASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm17330-201ENSMUST00000221047 165 ntBASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp1Q8BJQ2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gm38144-201ENSMUST00000192790 465 ntBASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Itm2b-204ENSMUST00000228637 783 ntBASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp1Q8BJQ2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm8810-201ENSMUST00000172895 754 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Proscos-202ENSMUST00000178990 666 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm2445-201ENSMUST00000182798 989 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm27514-201ENSMUST00000183692 110 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp1Q8BJQ2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms