Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gm7774-201ENSMUST00000200064 533 ntBASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2bQ8BJF9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm24513-201ENSMUST00000174964 138 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm27397-201ENSMUST00000184997 107 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Shd-206ENSMUST00000225145 998 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp2bQ8BJF9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Gm43514-201ENSMUST00000198852 424 ntBASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp2bQ8BJF9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms