Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Gm6973-201ENSMUST00000117080 721 ntBASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 AA619741-201ENSMUST00000195095 646 ntBASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc5a7Q8BGY9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm13823-201ENSMUST00000119930 345 ntBASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm11543-201ENSMUST00000120758 370 ntBASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm37714-201ENSMUST00000194742 342 ntBASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc5a7Q8BGY9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Rpph1-201ENSMUST00000175096 319 ntBASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Ank2-226ENSMUST00000189368 339 ntBASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Mir497b-201ENSMUST00000093601 125 ntBASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms