Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.74□□□□□ -0.37
Atg4bQ8BGE6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.73□□□□□ -0.37
Atg4bQ8BGE6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12341-201ENSMUST00000119724 503 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12403-201ENSMUST00000121384 959 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms