Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf40bQ80W14 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf40bQ80W14 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf40bQ80W14 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf40bQ80W14 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf40bQ80W14 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Gm6983-201ENSMUST00000214912 628 ntBASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.58■□□□□ 0.08
Prpf40bQ80W14 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gm15957-201ENSMUST00000118893 974 ntBASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gm38002-201ENSMUST00000193255 180 ntBASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.57■□□□□ 0.08
Prpf40bQ80W14 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Prpf40bQ80W14 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm13342-201ENSMUST00000121055 207 ntBASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm12882-201ENSMUST00000121696 517 ntBASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm44364-201ENSMUST00000198368 141 ntBASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf40bQ80W14 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms