Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh19Q80TF3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms