Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ctdp1Q7TSG2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctdp1Q7TSG2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Gm5779-201ENSMUST00000218467 910 ntBASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctdp1Q7TSG2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Gm6222-201ENSMUST00000120787 396 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Gm18027-201ENSMUST00000218947 619 ntBASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ctdp1Q7TSG2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms