Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.16□□□□□ -0.3
Scn4bQ7M729 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Mir6977-201ENSMUST00000184960 64 ntBASIC13.16□□□□□ -0.3
Scn4bQ7M729 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.16□□□□□ -0.3
Scn4bQ7M729 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.16□□□□□ -0.3
Scn4bQ7M729 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn4bQ7M729 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn4bQ7M729 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Gm15321-201ENSMUST00000121290 288 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn4bQ7M729 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.15□□□□□ -0.3
Scn4bQ7M729 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn4bQ7M729 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn4bQ7M729 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn4bQ7M729 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.14□□□□□ -0.31
Scn4bQ7M729 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms