Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.02□□□□□ -0.16
Cspg5Q71M36 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg5Q71M36 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.02□□□□□ -0.17
Cspg5Q71M36 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Gm13689-201ENSMUST00000119360 685 ntBASIC14.02□□□□□ -0.17
Cspg5Q71M36 Gm12882-201ENSMUST00000121696 517 ntBASIC14.02□□□□□ -0.17
Cspg5Q71M36 Snora78-201ENSMUST00000158630 128 ntBASIC14.02□□□□□ -0.17
Cspg5Q71M36 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.02□□□□□ -0.17
Cspg5Q71M36 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cspg5Q71M36 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gm8463-201ENSMUST00000208573 613 ntBASIC14.01□□□□□ -0.17
Cspg5Q71M36 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.01□□□□□ -0.17
Cspg5Q71M36 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg5Q71M36 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Cspg5Q71M36 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14□□□□□ -0.17
Cspg5Q71M36 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14□□□□□ -0.17
Cspg5Q71M36 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14□□□□□ -0.17
Cspg5Q71M36 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14□□□□□ -0.17
Cspg5Q71M36 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Gm5425-201ENSMUST00000214125 459 ntBASIC14□□□□□ -0.17
Cspg5Q71M36 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14□□□□□ -0.17
Cspg5Q71M36 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg5Q71M36 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms