Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.37□□□□□ -0.59
Rif1Q6PR54 Gm26315-201ENSMUST00000083890 321 ntBASIC11.37□□□□□ -0.59
Rif1Q6PR54 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm13385-201ENSMUST00000121089 220 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm26361-201ENSMUST00000158868 186 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rif1Q6PR54 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.36□□□□□ -0.59
Rif1Q6PR54 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm43916-201ENSMUST00000205062 967 ntBASIC11.35□□□□□ -0.59
Rif1Q6PR54 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.35□□□□□ -0.59
Rif1Q6PR54 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.35□□□□□ -0.59
Rif1Q6PR54 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms