Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm3890-201ENSMUST00000182416 207 ntBASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm19163-201ENSMUST00000223313 780 ntBASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Snrnp40Q6PE01 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.83□□□□□ -0.51
Snrnp40Q6PE01 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Snrnp40Q6PE01 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Snrnp40Q6PE01 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
Snrnp40Q6PE01 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Gm11637-201ENSMUST00000120601 592 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Gm26185-201ENSMUST00000157692 266 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Snrnp40Q6PE01 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gm6447-201ENSMUST00000118905 835 ntBASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Morn2-202ENSMUST00000227729 656 ntBASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms