Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm2651-201ENSMUST00000203560 838 ntBASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf220Q6PDX6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms