Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Gm13665-201ENSMUST00000120830 528 ntBASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Gm25668-201ENSMUST00000157700 129 ntBASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd4Q6PDQ2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Rps4l-202ENSMUST00000204242 789 ntBASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Mir339-201ENSMUST00000083659 96 ntBASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd4Q6PDQ2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gm14130-201ENSMUST00000118417 987 ntBASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Gm22058-201ENSMUST00000083393 310 ntBASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd4Q6PDQ2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm14109-201ENSMUST00000118814 309 ntBASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm5363-201ENSMUST00000211927 938 ntBASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms