Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Gm23935-201ENSMUST00000102303 57 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Gm24270-201ENSMUST00000102326 57 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Gm24245-201ENSMUST00000157318 57 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd3Q6P9Z1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd3Q6P9Z1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.4□□□□□ -0.43
Smarcd3Q6P9Z1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.4□□□□□ -0.43
Smarcd3Q6P9Z1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Smarcd3Q6P9Z1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm15653-201ENSMUST00000119247 907 ntBASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Mir1897-201ENSMUST00000122581 272 ntBASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Gm5779-201ENSMUST00000218467 910 ntBASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms