Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Gm37133-201ENSMUST00000192705 1922 ntBASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slx4Q6P1D7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Gm18393-201ENSMUST00000208349 1131 ntBASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.4■□□□□ 0.86
Slx4Q6P1D7 Gm43273-201ENSMUST00000199649 2594 ntBASIC20.39■□□□□ 0.86
Slx4Q6P1D7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slx4Q6P1D7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slx4Q6P1D7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slx4Q6P1D7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Gm8285-201ENSMUST00000208293 759 ntBASIC20.39■□□□□ 0.85
Slx4Q6P1D7 AC123665.1-201ENSMUST00000228204 438 ntBASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slx4Q6P1D7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm43908-201ENSMUST00000205074 1472 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12616-201ENSMUST00000118594 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm16481-201ENSMUST00000119074 1227 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12624-201ENSMUST00000177615 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12621-201ENSMUST00000177760 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12615-201ENSMUST00000177970 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12622-201ENSMUST00000177975 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12627-201ENSMUST00000178412 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12625-201ENSMUST00000179122 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12614-201ENSMUST00000179586 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm12613-201ENSMUST00000180323 382 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm9555-201ENSMUST00000200908 583 ntBASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Slx4Q6P1D7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Gm28182-201ENSMUST00000188354 2477 ntBASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slx4Q6P1D7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms