Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm24694-201ENSMUST00000180054 110 ntBASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Gm27663-201ENSMUST00000184839 110 ntBASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Gm44855-201ENSMUST00000205725 362 ntBASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Gm9797-201ENSMUST00000052902 613 ntBASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ParpbpQ6IRT3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Gm27437-201ENSMUST00000183429 107 ntBASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ParpbpQ6IRT3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Syt7-205ENSMUST00000224135 1557 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm6912-201ENSMUST00000117218 544 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm15321-201ENSMUST00000121290 288 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm24420-201ENSMUST00000176676 59 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm28760-201ENSMUST00000185995 736 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm18905-201ENSMUST00000205454 928 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ParpbpQ6IRT3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms