Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox19Q62249 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox19Q62249 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox19Q62249 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox19Q62249 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Sox19Q62249 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox19Q62249 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sox19Q62249 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.51□□□□□ -0.57
Sox19Q62249 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.51□□□□□ -0.57
Sox19Q62249 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox19Q62249 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox19Q62249 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.51□□□□□ -0.57
Sox19Q62249 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox19Q62249 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.51□□□□□ -0.57
Sox19Q62249 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.51□□□□□ -0.57
Sox19Q62249 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox19Q62249 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox19Q62249 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox19Q62249 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.5□□□□□ -0.57
Sox19Q62249 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Sox19Q62249 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Gm11025-201ENSMUST00000140773 466 ntBASIC11.5□□□□□ -0.57
Sox19Q62249 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Sox19Q62249 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.5□□□□□ -0.57
Sox19Q62249 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox19Q62249 Gm18057-201ENSMUST00000208220 503 ntBASIC11.5□□□□□ -0.57
Sox19Q62249 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.5□□□□□ -0.57
Sox19Q62249 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.5□□□□□ -0.57
Sox19Q62249 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox19Q62249 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sox19Q62249 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.5□□□□□ -0.57
Sox19Q62249 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox19Q62249 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox19Q62249 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms