Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.58■□□□□ 0.09
Scn9aQ62205 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.58■□□□□ 0.09
Scn9aQ62205 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Scn9aQ62205 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn9aQ62205 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Scn9aQ62205 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.58■□□□□ 0.08
Scn9aQ62205 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scn9aQ62205 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm9550-201ENSMUST00000161130 862 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Scn9aQ62205 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm44551-201ENSMUST00000208804 171 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.58■□□□□ 0.08
Scn9aQ62205 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.58■□□□□ 0.08
Scn9aQ62205 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn9aQ62205 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm14704-201ENSMUST00000120300 874 ntBASIC15.57■□□□□ 0.08
Scn9aQ62205 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm24749-201ENSMUST00000157838 343 ntBASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm18734-201ENSMUST00000172937 808 ntBASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn9aQ62205 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn9aQ62205 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Gm8285-201ENSMUST00000208293 759 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Gm8913-201ENSMUST00000209491 641 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Scn9aQ62205 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Scn9aQ62205 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Gm12208-201ENSMUST00000122004 163 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Gm45118-201ENSMUST00000208928 825 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.56■□□□□ 0.08
Scn9aQ62205 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.56■□□□□ 0.08
Scn9aQ62205 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.56■□□□□ 0.08
Scn9aQ62205 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Scn9aQ62205 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn9aQ62205 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.55■□□□□ 0.08
Scn9aQ62205 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Scn9aQ62205 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm11628-201ENSMUST00000117568 171 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms