Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.58■□□□□ 0.25
Trim27Q62158 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trim27Q62158 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim27Q62158 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim27Q62158 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim27Q62158 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Trim27Q62158 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim27Q62158 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim27Q62158 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim27Q62158 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim27Q62158 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim27Q62158 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim27Q62158 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim27Q62158 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim27Q62158 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.57■□□□□ 0.24
Trim27Q62158 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Mir7654-201ENSMUST00000185082 70 ntBASIC16.57■□□□□ 0.24
Trim27Q62158 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Gm37917-201ENSMUST00000194711 392 ntBASIC16.57■□□□□ 0.24
Trim27Q62158 Gm45841-201ENSMUST00000207700 164 ntBASIC16.57■□□□□ 0.24
Trim27Q62158 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim27Q62158 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim27Q62158 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim27Q62158 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim27Q62158 Gm5866-201ENSMUST00000177881 973 ntBASIC16.56■□□□□ 0.24
Trim27Q62158 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim27Q62158 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.56■□□□□ 0.24
Trim27Q62158 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim27Q62158 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
Trim27Q62158 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms