Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SspnQ62147 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SspnQ62147 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SspnQ62147 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
SspnQ62147 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.34□□□□□ -0.59
SspnQ62147 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SspnQ62147 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SspnQ62147 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Gm15693-201ENSMUST00000120470 637 ntBASIC11.34□□□□□ -0.59
SspnQ62147 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.34□□□□□ -0.59
SspnQ62147 Gm27533-201ENSMUST00000183800 152 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SspnQ62147 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Gm9229-201ENSMUST00000222777 126 ntBASIC11.34□□□□□ -0.59
SspnQ62147 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Mir497b-201ENSMUST00000093601 125 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SspnQ62147 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SspnQ62147 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.34□□□□□ -0.59
SspnQ62147 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.34□□□□□ -0.59
SspnQ62147 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SspnQ62147 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SspnQ62147 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
SspnQ62147 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SspnQ62147 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SspnQ62147 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Gm12428-201ENSMUST00000119844 727 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Gm22175-201ENSMUST00000175007 78 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Gm25144-201ENSMUST00000179561 110 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Gm25352-201ENSMUST00000179815 110 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Gm21470-201ENSMUST00000187680 696 ntBASIC11.33□□□□□ -0.6
SspnQ62147 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.33□□□□□ -0.6
SspnQ62147 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SspnQ62147 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SspnQ62147 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SspnQ62147 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SspnQ62147 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SspnQ62147 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms