Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Mir483-201ENSMUST00000093631 73 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.37□□□□□ -0.43
VcanQ62059 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VcanQ62059 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.37□□□□□ -0.43
VcanQ62059 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.37□□□□□ -0.43
VcanQ62059 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Gm12380-201ENSMUST00000119012 544 ntBASIC12.36□□□□□ -0.43
VcanQ62059 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.36□□□□□ -0.43
VcanQ62059 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VcanQ62059 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.36□□□□□ -0.43
VcanQ62059 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Mt1-202ENSMUST00000211807 1085 ntBASIC12.36□□□□□ -0.43
VcanQ62059 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.36□□□□□ -0.43
VcanQ62059 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.36□□□□□ -0.43
VcanQ62059 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.36□□□□□ -0.43
VcanQ62059 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Gm37246-201ENSMUST00000192665 835 ntBASIC12.36□□□□□ -0.43
VcanQ62059 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.36□□□□□ -0.43
VcanQ62059 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
VcanQ62059 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VcanQ62059 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.35□□□□□ -0.43
VcanQ62059 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.35□□□□□ -0.43
VcanQ62059 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VcanQ62059 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.35□□□□□ -0.43
VcanQ62059 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.35□□□□□ -0.43
VcanQ62059 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VcanQ62059 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VcanQ62059 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.35□□□□□ -0.43
VcanQ62059 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VcanQ62059 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.35□□□□□ -0.43
VcanQ62059 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.35□□□□□ -0.43
VcanQ62059 Gm9463-201ENSMUST00000206707 601 ntBASIC12.35□□□□□ -0.43
VcanQ62059 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.35□□□□□ -0.43
VcanQ62059 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VcanQ62059 Gm13296-201ENSMUST00000117854 997 ntBASIC12.35□□□□□ -0.43
VcanQ62059 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.35□□□□□ -0.43
VcanQ62059 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VcanQ62059 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.34□□□□□ -0.43
VcanQ62059 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.34□□□□□ -0.43
VcanQ62059 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
VcanQ62059 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcanQ62059 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms