Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.73■□□□□ 0.43
Gli3Q61602 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.73■□□□□ 0.43
Gli3Q61602 Gm2517-201ENSMUST00000215651 348 ntBASIC17.73■□□□□ 0.43
Gli3Q61602 AC133602.1-201ENSMUST00000227510 509 ntBASIC17.73■□□□□ 0.43
Gli3Q61602 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gli3Q61602 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.73■□□□□ 0.43
Gli3Q61602 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.73■□□□□ 0.43
Gli3Q61602 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Gli3Q61602 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gli3Q61602 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Gli3Q61602 Gm11451-201ENSMUST00000118946 630 ntBASIC17.72■□□□□ 0.43
Gli3Q61602 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.72■□□□□ 0.43
Gli3Q61602 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC17.72■□□□□ 0.43
Gli3Q61602 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Gm28071-201ENSMUST00000190355 478 ntBASIC17.72■□□□□ 0.43
Gli3Q61602 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC17.72■□□□□ 0.43
Gli3Q61602 Gm9132-201ENSMUST00000210182 832 ntBASIC17.72■□□□□ 0.43
Gli3Q61602 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gli3Q61602 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli3Q61602 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gli3Q61602 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.71■□□□□ 0.43
Gli3Q61602 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.71■□□□□ 0.43
Gli3Q61602 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC17.71■□□□□ 0.43
Gli3Q61602 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.71■□□□□ 0.43
Gli3Q61602 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gli3Q61602 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gli3Q61602 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli3Q61602 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gli3Q61602 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Gli3Q61602 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Gm10774-201ENSMUST00000188689 204 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Gm4482-201ENSMUST00000200876 742 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Gm44980-201ENSMUST00000205826 314 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gli3Q61602 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm11470-201ENSMUST00000118868 1475 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.7■□□□□ 0.42
Gli3Q61602 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC17.7■□□□□ 0.42
Gli3Q61602 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.7■□□□□ 0.42
Gli3Q61602 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms