Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox17Q61473 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox17Q61473 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox17Q61473 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Gm44719-201ENSMUST00000206404 149 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.65□□□□□ -0.38
Sox17Q61473 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox17Q61473 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox17Q61473 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox17Q61473 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sox17Q61473 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sox17Q61473 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Sox17Q61473 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox17Q61473 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox17Q61473 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox17Q61473 Gm38225-201ENSMUST00000194001 393 ntBASIC12.64□□□□□ -0.39
Sox17Q61473 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.64□□□□□ -0.39
Sox17Q61473 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox17Q61473 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox17Q61473 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.64□□□□□ -0.39
Sox17Q61473 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox17Q61473 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.64□□□□□ -0.39
Sox17Q61473 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox17Q61473 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox17Q61473 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sox17Q61473 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Sox17Q61473 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sox17Q61473 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox17Q61473 Gm13015-201ENSMUST00000118674 204 ntBASIC12.63□□□□□ -0.39
Sox17Q61473 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.63□□□□□ -0.39
Sox17Q61473 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms