Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm8194-201ENSMUST00000159783 859 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm37666-201ENSMUST00000194110 866 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.8□□□□□ -0.04
Col11a1Q61245 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.79□□□□□ -0.04
Col11a1Q61245 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col11a1Q61245 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a1Q61245 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm24845-201ENSMUST00000158034 109 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm5369-201ENSMUST00000217499 588 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Col11a1Q61245 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm18730-201ENSMUST00000218038 343 ntBASIC14.78□□□□□ -0.04
Col11a1Q61245 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.78□□□□□ -0.04
Col11a1Q61245 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a1Q61245 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a1Q61245 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col11a1Q61245 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.77□□□□□ -0.04
Col11a1Q61245 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a1Q61245 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.77□□□□□ -0.05
Col11a1Q61245 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Gm9211-201ENSMUST00000182882 975 ntBASIC14.77□□□□□ -0.05
Col11a1Q61245 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.77□□□□□ -0.05
Col11a1Q61245 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.77□□□□□ -0.05
Col11a1Q61245 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Col11a1Q61245 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Col11a1Q61245 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a1Q61245 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms