Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.18■□□□□ 0.18
Mre11Q61216 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.18■□□□□ 0.18
Mre11Q61216 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.18■□□□□ 0.18
Mre11Q61216 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Mre11Q61216 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Mir874-201ENSMUST00000104769 76 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Mre11Q61216 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Thap2-203ENSMUST00000218989 527 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Rps4l-201ENSMUST00000071745 943 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.17■□□□□ 0.18
Mre11Q61216 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Mre11Q61216 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mre11Q61216 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.16■□□□□ 0.18
Mre11Q61216 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.16■□□□□ 0.18
Mre11Q61216 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Mre11Q61216 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Mzt1-203ENSMUST00000227948 952 ntBASIC16.16■□□□□ 0.18
Mre11Q61216 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Mre11Q61216 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mre11Q61216 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC16.15■□□□□ 0.18
Mre11Q61216 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Gm6443-201ENSMUST00000203599 874 ntBASIC16.15■□□□□ 0.18
Mre11Q61216 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Mre11Q61216 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mre11Q61216 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.14■□□□□ 0.18
Mre11Q61216 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.14■□□□□ 0.17
Mre11Q61216 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mre11Q61216 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms