Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm45453-201ENSMUST00000211758 853 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm21362-201ENSMUST00000194272 928 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm44492-201ENSMUST00000197012 141 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms