Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h1Q4VGL6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm19087-201ENSMUST00000191430 946 ntBASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm9899-201ENSMUST00000065519 555 ntBASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h1Q4VGL6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm6447-201ENSMUST00000118905 835 ntBASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm13369-201ENSMUST00000119442 987 ntBASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm37424-201ENSMUST00000191727 561 ntBASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h1Q4VGL6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gm12742-201ENSMUST00000117326 410 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.56■□□□□ 0.08
Rc3h1Q4VGL6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms