Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdkl5Q3UTQ8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cdkl5Q3UTQ8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cdkl5Q3UTQ8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm38144-201ENSMUST00000192790 465 ntBASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm44855-201ENSMUST00000205725 362 ntBASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdkl5Q3UTQ8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12403-201ENSMUST00000121384 959 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm15376-201ENSMUST00000122258 783 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Mir6977-201ENSMUST00000184960 64 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm18041-201ENSMUST00000218210 618 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cdkl5Q3UTQ8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms