Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mir698-201ENSMUST00000102164 109 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Mir6923-201ENSMUST00000184592 72 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm37028-201ENSMUST00000194276 107 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm32025-201ENSMUST00000217960 307 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm12380-201ENSMUST00000119012 544 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm11980-201ENSMUST00000121445 986 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm12628-201ENSMUST00000122193 382 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Spg11Q3UHA3 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm11354-201ENSMUST00000121974 422 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spg11Q3UHA3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms