Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Mir449b-201ENSMUST00000104833 80 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Gm5566-201ENSMUST00000116118 459 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Gm13616-201ENSMUST00000120600 222 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Mir6956-201ENSMUST00000183598 62 ntBASIC14.34□□□□□ -0.11
Trim43aQ3TL54 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Gm6916-202ENSMUST00000205523 195 ntBASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43aQ3TL54 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43aQ3TL54 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43aQ3TL54 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43aQ3TL54 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43aQ3TL54 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trim43aQ3TL54 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gm15678-201ENSMUST00000117573 960 ntBASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.33□□□□□ -0.12
Trim43aQ3TL54 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gm9719-201ENSMUST00000162765 543 ntBASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43aQ3TL54 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms