Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gm38294-201ENSMUST00000192831 381 ntBASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cul4aQ3TCH7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Gm14767-201ENSMUST00000121559 586 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Mir7221-201ENSMUST00000184009 72 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Gm18905-201ENSMUST00000205454 928 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Gm45841-201ENSMUST00000207700 164 ntBASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cul4aQ3TCH7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms