Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Gm5616-201ENSMUST00000165252 384 ntBASIC18.69■□□□□ 0.58
Trpm1Q2TV84 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Gm8741-201ENSMUST00000174736 384 ntBASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Gm8365-201ENSMUST00000197334 648 ntBASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trpm1Q2TV84 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Mir6546-201ENSMUST00000184460 62 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 AC159205.5-202ENSMUST00000224849 386 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Gm13812-201ENSMUST00000118061 1347 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Gm13810-201ENSMUST00000118584 1347 ntBASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trpm1Q2TV84 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm19459-201ENSMUST00000176240 835 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm10312-201ENSMUST00000078515 489 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm15515-201ENSMUST00000117827 822 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm17391-201ENSMUST00000171036 126 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm10752-201ENSMUST00000218348 729 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 AC140293.1-201ENSMUST00000225626 1247 ntBASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trpm1Q2TV84 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trpm1Q2TV84 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms