Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hspg2Q05793 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm44967-201ENSMUST00000207047 631 ntBASIC9.67□□□□□ -0.86
Hspg2Q05793 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.67□□□□□ -0.86
Hspg2Q05793 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.67□□□□□ -0.86
Hspg2Q05793 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm21811-201ENSMUST00000096485 930 ntBASIC9.67□□□□□ -0.86
Hspg2Q05793 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.67□□□□□ -0.86
Hspg2Q05793 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.67□□□□□ -0.86
Hspg2Q05793 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hspg2Q05793 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm23270-201ENSMUST00000104055 131 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm14109-201ENSMUST00000118814 309 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm17208-201ENSMUST00000168388 535 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.66□□□□□ -0.86
Hspg2Q05793 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hspg2Q05793 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hspg2Q05793 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hspg2Q05793 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hspg2Q05793 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms